PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000124687
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family G2-like
Protein Properties Length: 461aa    MW: 51600.9 Da    PI: 7.7672
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000124687genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like35.42.4e-11260284125
        G2-like   1 kprlrWtpeLHerFveaveqLGGse 25 
                    k+r++W+peLH++Fv+a++qLGGs+
  MDP0000124687 260 KQRRCWSPELHRKFVNALQQLGGSQ 284
                    79*********************97 PP

2G2-like513.1e-163503802656
        G2-like  26 kAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                    +AtPk+i+elm+v+gLt+++vkSHLQkYR +
  MDP0000124687 350 VATPKQIRELMQVDGLTNDEVKSHLQKYRXH 380
                    7****************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.5E-26257284IPR009057Homeodomain-like
TIGRFAMsTIGR015577.3E-8260290IPR006447Myb domain, plants
SuperFamilySSF466895.02E-7342383IPR009057Homeodomain-like
TIGRFAMsTIGR015578.7E-14343380IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.603.5E-26351383IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MGSVPPELSL DFKPTFVPKT ISDFLKEVSM IGNVSEKLSK LDDFVKRLED EMRKIDAFKR  60
ELPLCMFLLN DAIRALKEDA MQCAAPKVQP VLEEFIPMKK DCDKNKGGSG NNNKKEKDSR  120
DKKNWMSSVQ LWNTDNYHQH PSSDSPYDRK RVSEIDSKRN EAENGVANED PFQTCRNRTG  180
GRAFMPFKGY PAFSVTPLRL EEKEELPVHG LSLLTPGIKN PKEESTSSGS RSTCGRSVSF  240
STANTQSNTR TPPQQPTSRK QRRCWSPELH RKFVNALQQL GGSQGPNDIS MNLLIERPNI  300
CCITDIHGFG IPKDELIVSL YTAYIVVVDY YTLYSPTIAV SYLRFYDIAV ATPKQIRELM  360
QVDGLTNDEV KSHLQKYRXH TRRVPGAAAA GSEKQSVGLG VLWMSQDQYM DSSKASSSQS  420
GSPQGPLQLT GTGGDDEDNE DAKSESYSWK GHIHKPGKDD V
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Mdo.54380.0bud| leaf| stem
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009345970.10.0PREDICTED: uncharacterized protein LOC103937747
RefseqXP_009345969.10.0PREDICTED: uncharacterized protein LOC103937746
TrEMBLM5VM721e-179M5VM72_PRUPE; Uncharacterized protein
STRINGVIT_03s0063g01060.t011e-121(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120834107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.12e-32G2-like family protein